STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115176555Ceramide synthase 2-like. (377 aa)    
Predicted Functional Partners:
SGPP2
Sphingosine-1-phosphate phosphatase 2.
    
 0.907
ENSSTUP00000070510
Si:ch211-212g7.6.
    
 0.907
sgpp1
Sphingosine-1-phosphate phosphatase 1.
    
 0.907
smpd2
Sphingomyelin phosphodiesterase 2.
     
 0.897
asah2
N-acylsphingosine amidohydrolase 2.
     
 0.896
LOC115154373
Alkaline ceramidase 3-like.
    
 0.889
degs2
Delta 4-desaturase, sphingolipid 2.
   
 0.889
LOC115148915
Alkaline ceramidase 3-like.
    
 0.889
smpd1
Sphingomyelin phosphodiesterase 1.
     
 0.877
LOC115168474
Ceramide synthase 5-like.
  
 
0.868
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.