STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115168689Synaptophysin-like protein 1. (266 aa)    
Predicted Functional Partners:
LOC115204236
Vesicle-associated membrane protein 2-like.
   
 0.646
LOC115176665
Vesicle-associated membrane protein 1-like.
   
 0.646
LOC115154638
Vesicle-associated membrane protein 2.
   
 0.646
LOC115176195
Vesicle-associated membrane protein 2-like.
   
 0.646
LOC115188233
Vesicle-associated membrane protein 1-like.
   
 0.646
LOC115173511
Vesicle-associated membrane protein 2-like.
   
 0.646
LOC115167648
Synaptosomal-associated protein 25-A-like.
   
 0.577
ENSSTUP00000052220
annotation not available
   
 0.577
LOC115174530
Synaptosomal-associated protein 25-A.
   
 0.577
vamp3
Vesicle associated membrane protein 3.
    
 0.574
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.