STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115206366Protein Smaug homolog 2-like. (679 aa)    
Predicted Functional Partners:
ENSSTUP00000066643
Nanos homolog 1.
    
 
 0.680
ENSSTUP00000094525
Nanos homolog 1.
    
 
 0.680
LOC115206047
14-3-3 protein epsilon-like.
    
   0.588
LOC115148621
14-3-3 protein epsilon.
    
   0.588
LOC115163101
14-3-3 protein epsilon-like.
    
   0.588
LOC115154109
14-3-3 protein epsilon.
    
   0.588
rnpc3
RNA binding region (RNP1, RRM) containing 3.
      
 0.511
pum1
Pumilio RNA binding family member 1.
    
 
 0.478
ENSSTUP00000103887
Pumilio RNA-binding family member 1.
    
 
 0.478
LOC115195665
Pumilio homolog 2-like.
    
 
 0.478
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (16%) [HD]