STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115152087Rab-like protein 2A. (224 aa)    
Predicted Functional Partners:
ENSSTUP00000053905
annotation not available
    
 0.951
ENSSTUP00000070599
Intersectin 2b.
    
 0.951
ENSSTUP00000040064
Intersectin 1 (SH3 domain protein).
    
 0.930
ENSSTUP00000091247
Intersectin 1 (SH3 domain protein).
    
 0.930
cep19
Centrosomal protein 19.
    
 
 0.895
LOC115198276
RING finger protein 227-like.
  
 0.874
LOC115197715
Guanine nucleotide exchange factor for Rab-3A-like.
    
 0.870
LOC115192924
Guanine nucleotide exchange factor for Rab-3A-like.
    
 0.870
LOC115189923
rab-3A-interacting protein-like.
    
 0.870
LOC115200915
Rab11 family-interacting protein 3-like.
    
 0.831
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.