STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115171785Cytochrome P450 2K1-like. (504 aa)    
Predicted Functional Partners:
ENSSTUP00000016287
Acetylserotonin O-methyltransferase-like.
     
 0.898
ENSSTUP00000040632
Epoxide hydrolase 2, cytoplasmic.
   
 0.891
ENSSTUP00000051424
Epoxide hydrolase 2, cytoplasmic.
   
 0.891
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.887
suox
Sulfite oxidase.
    
 0.873
LOC115192191
Cytosolic phospholipase A2-like.
    
 0.831
pla2g4a
Phospholipase A2 group IVA.
    
 0.831
LOC115169910
Cytosolic phospholipase A2-like.
    
 0.831
LOC115177511
Nibrin-like.
    
 0.807
ENSSTUP00000000158
Cytochrome b5 reductase 4.
   
 0.799
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.