STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115180084Ubl carboxyl-terminal hydrolase 18-like. (339 aa)    
Predicted Functional Partners:
LOC115207663
Interferon-induced GTP-binding protein Mx1.
   
 0.977
ddx58
DExD/H-box helicase 58.
   
 
 0.969
ifih1
Interferon induced with helicase C domain 1.
   
 
 0.952
LOC115197943
Probable ATP-dependent RNA helicase DHX58.
   
 
 0.950
LOC115171111
Probable ATP-dependent RNA helicase DHX58.
   
 
 0.950
rsad2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.929
LOC115172835
Radical S-adenosyl methionine domain-containing protein 2-like.
   
  
 0.929
cmpk2
Cytidine/uridine monophosphate kinase 2.
   
  
 0.917
LOC115206143
E3 ubiquitin-protein ligase TRIP12-like.
   
 
 0.915
ENSSTUP00000075842
Thyroid hormone receptor interactor 12.
   
 
 0.915
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.