STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TENT5A-2Terminal nucleotidyltransferase 5A-like. (402 aa)    
Predicted Functional Partners:
LOC115162262
Serine/threonine-protein kinase PLK4-like.
    
 
 0.633
LOC115172555
Serine/threonine-protein kinase PLK4-like.
    
 
 0.633
BCCIP
Protein BCCIP homolog.
    
 
 0.473
ENSSTUP00000104557
BRCA2 and CDKN1A interacting protein.
    
 
 0.473
ENSSTUP00000057622
Centrosomal protein 192.
    
 
 0.449
ENSSTUP00000058462
annotation not available
    
 
 0.449
ENSSTUP00000058503
annotation not available
    
 
 0.449
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.