STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115153193Cyclic GMP-AMP synthase-like. (470 aa)    
Predicted Functional Partners:
LOC115175959
Cyclic GMP-AMP synthase-like.
  
  
 
0.863
LOC115205559
Stimulator of interferon genes protein-like.
  
 
 0.836
ENSSTUP00000017199
Si:dkey-197i20.6.
    
  0.833
LOC115151677
Gamma-interferon-inducible lysosomal thiol reductase-like.
    
  0.833
LOC115156744
Gamma-interferon-inducible lysosomal thiol reductase-like.
    
  0.833
LOC115169949
Gamma-interferon-inducible lysosomal thiol reductase-like.
    
  0.833
thrsp
Thyroid hormone responsive.
    
  0.740
rag1
Recombination activating 1.
      
 0.613
ENSSTUP00000089042
Toll-like receptor 18.
      
 0.566
LOC115176782
Toll-like receptor 2 type-2.
      
 0.566
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.