STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myo18bMyosin XVIIIB. (2192 aa)    
Predicted Functional Partners:
ENSSTUP00000085258
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.881
LOC115155641
Myosin light chain 1, skeletal muscle isoform-like.
   
 0.881
LOC115150584
Myosin light polypeptide 6-like.
   
 0.799
LOC115207823
Myosin light polypeptide 6.
   
 0.799
ENSSTUP00000060146
annotation not available
   
 0.799
LOC115167830
Myosin light polypeptide 6-like.
   
 0.799
MYL12B
Myosin regulatory light polypeptide 9-like.
   
 0.775
MYL7
Myosin regulatory light chain 2, atrial isoform-like.
   
 0.775
LOC115164223
Myosin regulatory light chain 2, atrial isoform-like.
   
 0.775
LOC115195786
Myosin regulatory light polypeptide 9.
   
 0.775
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.