STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115204430dnaJ homolog subfamily C member 18-like. (392 aa)    
Predicted Functional Partners:
LOC115205453
Stress-70 protein, mitochondrial-like.
 
 0.856
LOC115174904
Stress-70 protein, mitochondrial.
 
 0.856
ENSSTUP00000104720
annotation not available
 
 0.838
ENSSTUP00000104550
Heat shock protein 14.
 
 0.837
hspa5
Heat shock protein family A (Hsp70) member 5.
 
 0.836
ENSSTUP00000014339
annotation not available
 
 0.834
LOC115162263
Heat shock 70 kDa protein 4L-like.
 
 0.829
LOC115172554
Heat shock 70 kDa protein 4L-like.
 
 0.829
HSPA4
Heat shock 70 kDa protein 4-like.
 
 0.828
LOC115148521
Heat shock 70 kDa protein 4-like.
 
 0.827
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.