STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115165976Laminin subunit beta-2-like. (1785 aa)    
Predicted Functional Partners:
LOC115169791
Laminin subunit gamma-1-like.
   
0.909
LOC115169793
Laminin subunit gamma-2-like.
   
0.909
LOC115203859
Laminin subunit gamma-3-like.
   
0.909
LOC115156980
Laminin subunit gamma-2-like.
   
0.909
LOC115156982
Laminin subunit gamma-1-like.
   
0.909
LOC115159796
Laminin subunit gamma-3-like.
   
0.909
LOC115165649
Integrin alpha-5-like.
    
 0.905
ENSSTUP00000016716
Integrin, alpha 2b.
    
 0.905
LOC115180239
Integrin alpha-8-like.
    
 0.905
itgav
Integrin subunit alpha V.
    
 0.905
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.