STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115152905Adapter protein CIKS-like. (454 aa)    
Predicted Functional Partners:
LOC115203637
TNF receptor-associated factor 6-like.
    
 0.908
LOC115166780
TNF receptor-associated factor 6-like.
    
 0.908
ENSSTUP00000078650
annotation not available
    
 0.837
LOC115191059
Interleukin-17 receptor A-like.
    
 0.837
ENSSTUP00000116558
annotation not available
    
 0.837
LOC115150972
Macrophage-stimulating protein receptor-like.
    
 0.825
LOC115207569
Macrophage-stimulating protein receptor-like.
    
 0.825
LOC115152322
Hepatocyte growth factor receptor-like.
    
 0.825
ENSSTUP00000051999
Macrophage stimulating 1 receptor a.
    
 0.825
LOC115150855
Macrophage-stimulating protein receptor-like.
    
 0.825
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.