STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snap23Synaptosome associated protein 23. (247 aa)    
Predicted Functional Partners:
vamp3
Vesicle associated membrane protein 3.
   
 0.988
ENSSTUP00000110979
annotation not available
   
 0.988
LOC115158465
Vesicle-associated membrane protein 4-like.
   
 0.967
VAMP4
Vesicle associated membrane protein 4.
   
 0.967
LOC115149317
Vesicle-associated membrane protein 8-like.
   
 0.961
ENSSTUP00000003167
Vesicle-associated membrane protein 8 (endobrevin).
   
 0.955
LOC115164281
Vesicle-associated membrane protein 8-like.
   
 0.955
LOC115171039
syntaxin-1B.
    
 0.952
STX3
Syntaxin-3-like.
    
 0.952
LOC115171039-2
syntaxin-1B.
    
 0.952
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.