STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_34577Uncharacterized protein. (377 aa)    
Predicted Functional Partners:
BC332_07445
CCR4-NOT transcription complex subunit 3.
    
 0.857
BC332_28549
Putative NOT transcription complex subunit VIP2.
    
 0.808
BC332_17113
Putative NOT transcription complex subunit VIP2.
    
 0.808
BC332_13210
Uncharacterized protein.
    
 0.761
BC332_21494
Uncharacterized protein.
    
 0.749
BC332_10046
Thioredoxin-like 4, chloroplastic.
    
 0.749
BC332_03135
CCR4-NOT transcription complex subunit 1.
    
 0.749
BC332_03134
Uncharacterized protein.
    
 0.749
BC332_32586
RING-type domain-containing protein.
    
 0.702
BC332_28670
Uncharacterized protein.
    
 0.702
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.