STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_32737Protein Ycf2; Probable ATPase of unknown function. Its presence in a non- photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis; Belongs to the Ycf2 family. (402 aa)    
Predicted Functional Partners:
BC332_00265
AB hydrolase-1 domain-containing protein.
    
 0.637
ycf1-2
Protein TIC 214; Involved in protein precursor import into chloroplasts. May be part of an intermediate translocation complex acting as a protein- conducting channel at the inner envelope.
  
  
 0.578
BC332_27104
Protein Ycf2.
 
     0.530
BC332_21991
Protein Ycf2.
 
     0.530
BC332_20894
Protein Ycf2.
 
     0.529
BC332_24108
Uncharacterized protein.
 
     0.526
BC332_00552
Protein Ycf2.
 
     0.526
BC332_28057
Protein Ycf2.
 
     0.521
BC332_10648
Uncharacterized protein.
 
     0.518
BC332_18627
MCRS_N domain-containing protein.
    
 0.484
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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