STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_32692Elongation factor G, chloroplastic. (561 aa)    
Predicted Functional Partners:
BC332_20883
60S ribosomal protein L5.
  
 0.958
BC332_05447
Uncharacterized protein.
  
 
 0.956
BC332_29043
50S ribosomal protein L9, chloroplastic.
  
 
 0.953
BC332_18356
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.950
BC332_32691
Elongation factor G-1, chloroplastic.
 
     0.949
BC332_26946
40S ribosomal protein S28.
  
 0.940
BC332_09117
40S ribosomal protein S19-2.
   
 0.936
BC332_32703
60S ribosomal protein L30.
  
 0.932
BC332_33494
Ribosomal protein S7; Belongs to the universal ribosomal protein uS7 family.
 
 0.929
rps7
30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.
 
 0.928
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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