STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_32537Uncharacterized protein. (169 aa)    
Predicted Functional Partners:
BC332_32152
Uncharacterized protein.
      
 0.528
BC332_07990
Putative cleavage and polyadenylation specificity factor subunit 1.
   
    0.478
BC332_07983
Uncharacterized protein.
   
    0.478
BC332_00394
TPX2_importin domain-containing protein.
   
    0.478
BC332_20983
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
    
 0.431
BC332_14261
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
    
 0.431
BC332_03391
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
    
 0.431
BC332_27080
Multicopper oxidase LPR1.
    
 
 0.422
BC332_22365
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
    
 
 0.421
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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