STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_32374Uncharacterized protein. (105 aa)    
Predicted Functional Partners:
BC332_15183
Actin-related protein 5; Belongs to the actin family.
    
 0.785
BC332_29111
DNA helicase; Belongs to the RuvB family.
    
 0.782
BC332_34788
Actin-like protein 6B; Belongs to the actin family.
   
 0.780
BC332_16629
Uncharacterized protein.
    
 0.744
BC332_28341
Uncharacterized protein.
    
 0.743
BC332_06794
Actin-related protein 9; Belongs to the actin family.
    
 0.743
BC332_15516
Uncharacterized protein.
    
 0.709
BC332_02363
General transcription factor IIH subunit.
    
 0.699
BC332_14548
TFIIH basal transcription factor complex helicase XPD subunit.
    
 0.684
BC332_14849
Uncharacterized protein.
    
 0.671
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.