STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_29701Dof zinc finger protein DOF5.3. (370 aa)    
Predicted Functional Partners:
BC332_19791
Putative WRKY transcription factor 34.
  
     0.478
BC332_28239
Ethylene-responsive transcription factor LEP.
  
     0.466
BC332_00759
Putative transcriptional regulator RABBIT EARS.
  
     0.466
BC332_17379
AP2/ERF domain-containing protein.
  
     0.460
BC332_24920
Uncharacterized protein.
  
     0.456
BC332_19237
Uncharacterized protein.
  
     0.448
BC332_11818
Uncharacterized protein.
  
     0.441
BC332_31927
Tify domain-containing protein.
  
     0.439
BC332_27079
HMA domain-containing protein.
  
     0.434
BC332_28672
AP2-like ethylene-responsive transcription factor TOE3.
  
     0.433
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.