STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_30004XS domain-containing protein. (984 aa)    
Predicted Functional Partners:
BC332_04220
Zinc finger CCCH domain-containing protein 45.
    
 0.989
BC332_32050
Uncharacterized protein.
    
 0.924
BC332_33014
Ubiquitin carboxyl-terminal hydrolase 46; Belongs to the peptidase C19 family.
   
 0.881
BC332_30624
Ubiquitin carboxyl-terminal hydrolase 46; Belongs to the peptidase C19 family.
   
 0.881
BC332_28139
Mitotic spindle checkpoint protein MAD2.
   
 0.828
BC332_12708
Transcription initiation factor TFIID subunit 9.
    
 0.823
BC332_31311
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 0.822
BC332_23944
Anaphase-promoting complex subunit 6.
   
 0.802
BC332_09817
Transcription initiation factor TFIID subunit 2.
    
 0.801
BC332_31966
Ipi1_N domain-containing protein.
   
 0.783
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.