STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_30648Potassium channel AKT2/3. (875 aa)    
Predicted Functional Partners:
BC332_17800
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.452
BC332_12300
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.452
BC332_12982
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
      
 0.441
BC332_13822
Uncharacterized protein.
      
 0.440
BC332_09229
Aa_trans domain-containing protein.
      
 0.440
BC332_03785
Aa_trans domain-containing protein.
      
 0.440
BC332_05771
Aa_trans domain-containing protein.
      
 0.440
BC332_24790
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.419
BC332_00754
Abscisic acid receptor PYL1.
      
 0.408
BC332_15152
Potassium transporter; Potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
      
 0.405
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.