STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_30990Uncharacterized protein. (1009 aa)    
Predicted Functional Partners:
BC332_34719
RT_RNaseH_2 domain-containing protein.
  
     0.529
BC332_24023
RT_RNaseH_2 domain-containing protein.
  
     0.529
BC332_34831
RT_RNaseH_2 domain-containing protein.
  
     0.515
BC332_18653
RT_RNaseH_2 domain-containing protein.
  
     0.505
BC332_34745
RT_RNaseH domain-containing protein.
  
     0.503
BC332_34595
Integrase_H2C2 domain-containing protein.
  
     0.502
BC332_14109
Uncharacterized protein.
  
     0.502
BC332_34846
Uncharacterized protein.
  
     0.499
BC332_14060
Protein BONZAI 3.
  
     0.470
BC332_34779
Integrase catalytic domain-containing protein.
  
     0.464
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.