STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_31077Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
BC332_03955
Kinesin-like calmodulin-binding protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.666
BC332_19271
Uncharacterized protein.
   
 0.659
BC332_34541
DNA repair protein complementing XP-C cells-like protein.
    
 0.639
BC332_32427
Peptidylprolyl isomerase.
   
 0.621
BC332_12133
Uncharacterized protein.
    
 0.530
BC332_06389
Uncharacterized protein.
    
 0.492
BC332_31051
Two pore calcium channel protein 1B.
    
 0.470
BC332_31052
Two pore calcium channel protein 1.
    
 0.470
BC332_19288
Two pore calcium channel protein 1.
    
 0.470
BC332_01523
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic.
     
 0.467
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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