STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_31470Homeobox domain-containing protein. (520 aa)    
Predicted Functional Partners:
BC332_23354
Uncharacterized protein.
      
 0.521
BC332_18487
U1-type domain-containing protein.
      
 0.511
BC332_00679
DNA repair endonuclease UVH1.
     
 0.485
BC332_00680
PPIase cyclophilin-type domain-containing protein.
     
 0.485
BC332_00678
DNA repair endonuclease UVH1.
     
 0.485
BC332_02413
Crossover junction endonuclease MUS81.
     
 0.485
BC332_03955
Kinesin-like calmodulin-binding protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
  0.474
BC332_22045
DUF5311 domain-containing protein.
      
 0.447
BC332_08830
Uncharacterized protein.
  
 
   0.400
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.