STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_26760DUF4220 domain-containing protein. (719 aa)    
Predicted Functional Partners:
BC332_34656
Uncharacterized protein.
    
 0.673
BC332_23020
Uncharacterized protein.
  
     0.525
BC332_26752
Uncharacterized protein.
 
   
 0.516
BC332_30904
Uncharacterized protein.
  
     0.469
BC332_34823
Uncharacterized protein.
  
     0.467
BC332_33105
Uncharacterized protein.
  
 
  0.464
BC332_19317
Putative disease resistance protein.
  
 
   0.448
BC332_15550
Uncharacterized protein.
  
 
  0.447
BC332_25993
Uncharacterized protein.
  
     0.445
BC332_22851
Uncharacterized protein.
  
     0.443
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.