STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_23016Phenylalanine ammonia-lyase. (435 aa)    
Predicted Functional Partners:
BC332_12801
Histidinol-phosphate aminotransferase, chloroplastic.
    
 0.937
BC332_17960
4-coumarate--CoA ligase 1.
  
 
 0.930
BC332_05849
4-coumarate--CoA ligase-like 1.
    
 0.930
BC332_05134
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
     
 0.928
BC332_19320
Nicotianamine aminotransferase A.
   
 
 0.927
BC332_28658
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
     
 0.923
BC332_29078
4-coumarate--CoA ligase-like 7.
    
 0.922
BC332_08470
Putative 4-coumarate--CoA ligase 2.
  
 
 0.922
BC332_17793
4-coumarate--CoA ligase-like 6.
    
 0.917
BC332_01230
Arginase 1, mitochondrial; Belongs to the arginase family.
  
 
 0.915
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.