STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_23322Uncharacterized protein. (136 aa)    
Predicted Functional Partners:
BC332_23216
Serine/arginine-rich splicing factor RS2Z33.
   
 0.998
BC332_07086
Phytochrome A-associated F-box protein.
   
 0.988
BC332_07091
Phytochrome A-associated F-box protein.
   
 0.988
BC332_13431
Histone deacetylase complex subunit SAP18.
   
 0.942
BC332_08270
Histone deacetylase complex subunit SAP18.
   
 0.942
BC332_21449
Uncharacterized protein.
   
 0.935
BC332_06374
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
   
 0.935
BC332_05342
U1 small nuclear ribonucleoprotein 70 kDa.
   
 0.935
BC332_03145
Uncharacterized protein.
     
 0.930
BC332_08825
RRM domain-containing protein.
   
 0.911
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.