STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_24287Methyltransferase-like protein 5. (213 aa)    
Predicted Functional Partners:
BC332_10965
Multifunctional methyltransferase subunit-like protein.
    
 
 0.959
BC332_27382
HD domain-containing protein 2.
   
    0.728
BC332_18046
HD domain-containing protein 2.
   
    0.728
BC332_21907
U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family.
      
 0.636
BC332_15858
Uncharacterized protein.
      
 0.623
BC332_06360
PORR domain-containing protein.
      
 0.623
BC332_06199
C2H2-type domain-containing protein.
      
 0.623
BC332_22621
Uncharacterized protein.
      
 0.592
BC332_19234
Uncharacterized protein.
      
 0.592
BC332_13320
YrdC-like domain-containing protein.
      
 0.592
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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