STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_20547Lysine-specific demethylase. (840 aa)    
Predicted Functional Partners:
BC332_30725
ATP synthase delta chain, chloroplastic.
  
 0.839
BC332_13566
Uncharacterized protein.
  
 0.839
BC332_02383
ATP synthase subunit O, mitochondrial.
  
 0.839
BC332_34115
ATP synthase subunit b, chloroplastic; Belongs to the ATPase B chain family.
  
 0.789
BC332_01790
ATP synthase subunit b, chloroplastic; Belongs to the ATPase B chain family.
  
 0.789
BC332_02352
ATP synthase subunit b, chloroplastic.
  
 0.789
BC332_02513
ATP synthase subunit b, chloroplastic; Belongs to the ATPase B chain family.
  
 0.789
atpI
ATP synthase subunit a, chloroplastic; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
  
 0.769
BC332_32317
ATP synthase subunit a, chloroplastic.
  
 0.769
BC332_25470
ATP synthase subunit a.
  
 0.769
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.