STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_20551Syntaxin; Belongs to the syntaxin family. (273 aa)    
Predicted Functional Partners:
BC332_18124
Synaptobrevin-like protein YKT6; Belongs to the synaptobrevin family.
   
 0.995
BC332_27697
t-SNARE coiled-coil homology domain-containing protein.
   
 0.991
BC332_09162
Vesicle transport v-SNARE 12.
   
 0.991
BC332_26696
Syntaxin.
    
 0.981
BC332_19909
Syntaxin.
    
 0.981
BC332_07791
Bet1-like SNARE 1-1.
   
 0.958
BC332_19739
Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family.
    
 
 0.902
BC332_14348
Vacuolar protein-sorting-associated protein 33-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.902
BC332_15984
Syntaxin; Belongs to the syntaxin family.
  
  
 
0.898
BC332_00883
Syntaxin; Belongs to the syntaxin family.
  
  
 
0.898
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.