STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_21725Uncharacterized protein. (111 aa)    
Predicted Functional Partners:
BC332_02113
Tify domain-containing protein.
   
 
 0.692
BC332_20245
Transcription factor MYC2.
   
 
 0.682
BC332_00742
Transcription factor MYC2.
   
 
 0.682
BC332_30594
Transcription factor ABA-INDUCIBLE bHLH-TYPE.
   
 
 0.678
BC332_30597
Transcription factor bHLH13.
   
 
 0.678
BC332_21648
Transcription factor bHLH13.
   
 
 0.678
BC332_16589
Ninja-family protein.
    
 
 0.641
BC332_32169
Tify domain-containing protein.
   
 
 0.594
BC332_29467
Tify domain-containing protein.
   
 
 0.594
BC332_27642
Putative WRKY transcription factor 28.
    
 
 0.594
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.