Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC332_05447 | BC332_22148 | A0A2G3D853 | A0A2G3BUY1 | Uncharacterized protein. | DNA-directed RNA polymerases II, IV and V subunit 3. | 0.970 |
BC332_05447 | BC332_23289 | A0A2G3D853 | A0A2G3BJZ7 | Uncharacterized protein. | DNA-directed RNA polymerases II, IV and V subunit 6A. | 0.912 |
BC332_05447 | BC332_29043 | A0A2G3D853 | A0A2G3BBH1 | Uncharacterized protein. | 50S ribosomal protein L9, chloroplastic. | 0.999 |
BC332_12982 | BC332_17278 | A0A2G3CF00 | A0A2G3CBH6 | Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. | DNA-directed RNA polymerase II subunit 4. | 0.990 |
BC332_12982 | BC332_17553 | A0A2G3CF00 | A0A2G3CC94 | Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. | DNA-directed RNA polymerases I, II, and III subunit RPABC5. | 0.986 |
BC332_12982 | BC332_22148 | A0A2G3CF00 | A0A2G3BUY1 | Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. | DNA-directed RNA polymerases II, IV and V subunit 3. | 0.950 |
BC332_12982 | BC332_23289 | A0A2G3CF00 | A0A2G3BJZ7 | Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. | DNA-directed RNA polymerases II, IV and V subunit 6A. | 0.982 |
BC332_12982 | BC332_29136 | A0A2G3CF00 | A0A2G3BBN3 | Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. | DNA-directed RNA polymerases II, IV and V subunit 11. | 0.990 |
BC332_15326 | BC332_15516 | A0A2G3C5W8 | A0A2G3C6F6 | Uncharacterized protein. | Uncharacterized protein. | 0.704 |
BC332_15326 | BC332_17278 | A0A2G3C5W8 | A0A2G3CBH6 | Uncharacterized protein. | DNA-directed RNA polymerase II subunit 4. | 0.586 |
BC332_15326 | BC332_17553 | A0A2G3C5W8 | A0A2G3CC94 | Uncharacterized protein. | DNA-directed RNA polymerases I, II, and III subunit RPABC5. | 0.989 |
BC332_15326 | BC332_22148 | A0A2G3C5W8 | A0A2G3BUY1 | Uncharacterized protein. | DNA-directed RNA polymerases II, IV and V subunit 3. | 0.952 |
BC332_15326 | BC332_23289 | A0A2G3C5W8 | A0A2G3BJZ7 | Uncharacterized protein. | DNA-directed RNA polymerases II, IV and V subunit 6A. | 0.998 |
BC332_15326 | BC332_29136 | A0A2G3C5W8 | A0A2G3BBN3 | Uncharacterized protein. | DNA-directed RNA polymerases II, IV and V subunit 11. | 0.424 |
BC332_15326 | BC332_29434 | A0A2G3C5W8 | A0A2G3AZJ4 | Uncharacterized protein. | RNA_pol_L_2 domain-containing protein. | 0.998 |
BC332_15516 | BC332_15326 | A0A2G3C6F6 | A0A2G3C5W8 | Uncharacterized protein. | Uncharacterized protein. | 0.704 |
BC332_15516 | BC332_17278 | A0A2G3C6F6 | A0A2G3CBH6 | Uncharacterized protein. | DNA-directed RNA polymerase II subunit 4. | 0.411 |
BC332_15516 | BC332_17553 | A0A2G3C6F6 | A0A2G3CC94 | Uncharacterized protein. | DNA-directed RNA polymerases I, II, and III subunit RPABC5. | 0.990 |
BC332_15516 | BC332_22148 | A0A2G3C6F6 | A0A2G3BUY1 | Uncharacterized protein. | DNA-directed RNA polymerases II, IV and V subunit 3. | 0.962 |
BC332_15516 | BC332_23289 | A0A2G3C6F6 | A0A2G3BJZ7 | Uncharacterized protein. | DNA-directed RNA polymerases II, IV and V subunit 6A. | 0.993 |
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