STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_22191Uncharacterized protein. (602 aa)    
Predicted Functional Partners:
BC332_28494
Uncharacterized protein.
    
 
 0.621
BC332_28495
Uncharacterized protein.
    
 
 0.621
BC332_28496
Chromatin structure-remodeling complex protein SYD.
    
 
 0.621
BC332_28497
SnAC domain-containing protein.
    
 
 0.621
BC332_18452
Protein kinase domain-containing protein.
    
 
 0.428
BC332_02477
SWR1-complex protein 4.
    
 
 0.428
BC332_34177
Uncharacterized protein.
    
 
 0.419
BC332_34178
Transcription initiation factor TFIID subunit 1.
    
 
 0.419
BC332_31120
Uncharacterized protein.
    
 
 0.416
BC332_28389
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.416
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.