STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_22309Elongator complex protein 3. (336 aa)    
Predicted Functional Partners:
BC332_14221
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
   
 0.934
BC332_29645
Elongator complex protein 4.
   
 0.907
BC332_22308
Elongator complex protein 3.
 
     0.787
BC332_34284
Protein KTI12-like protein.
   
 
 0.702
BC332_28780
GTPase LSG1-2.
  
    0.661
BC332_02567
WD_REPEATS_REGION domain-containing protein.
   
   0.660
BC332_09461
Uncharacterized protein.
   
    0.646
BC332_31955
U3 small nucleolar ribonucleoprotein IMP4.
   
    0.637
BC332_08705
WD_REPEATS_REGION domain-containing protein.
   
    0.634
BC332_09633
Uncharacterized protein.
   
    0.634
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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