Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC332_04204 | BC332_06589 | A0A2G3D4H3 | A0A2G3CRY2 | DEAD-box ATP-dependent RNA helicase 16. | DEAD-box ATP-dependent RNA helicase 13; Belongs to the DEAD box helicase family. | 0.981 |
BC332_04204 | BC332_09915 | A0A2G3D4H3 | A0A2G3D1F2 | DEAD-box ATP-dependent RNA helicase 16. | CBF domain-containing protein. | 0.994 |
BC332_04204 | BC332_10268 | A0A2G3D4H3 | A0A2G3CKB6 | DEAD-box ATP-dependent RNA helicase 16. | Uncharacterized protein. | 0.944 |
BC332_04204 | BC332_16122 | A0A2G3D4H3 | A0A2G3C878 | DEAD-box ATP-dependent RNA helicase 16. | TMV resistance protein N. | 0.838 |
BC332_04204 | BC332_17999 | A0A2G3D4H3 | A0A2G3BX59 | DEAD-box ATP-dependent RNA helicase 16. | DEAD-box ATP-dependent RNA helicase 1. | 0.859 |
BC332_04204 | BC332_20374 | A0A2G3D4H3 | A0A2G3BPW3 | DEAD-box ATP-dependent RNA helicase 16. | Uncharacterized protein. | 0.979 |
BC332_04204 | BC332_20389 | A0A2G3D4H3 | A0A2G3BPY0 | DEAD-box ATP-dependent RNA helicase 16. | Uncharacterized protein. | 0.842 |
BC332_04204 | BC332_21699 | A0A2G3D4H3 | A0A2G3BTP1 | DEAD-box ATP-dependent RNA helicase 16. | Peter Pan-like protein. | 0.988 |
BC332_04204 | BC332_28627 | A0A2G3D4H3 | A0A2G3BA78 | DEAD-box ATP-dependent RNA helicase 16. | Something about silencing protein 10. | 0.838 |
BC332_04204 | BC332_33321 | A0A2G3D4H3 | A0A2G3AU58 | DEAD-box ATP-dependent RNA helicase 16. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.984 |
BC332_06589 | BC332_04204 | A0A2G3CRY2 | A0A2G3D4H3 | DEAD-box ATP-dependent RNA helicase 13; Belongs to the DEAD box helicase family. | DEAD-box ATP-dependent RNA helicase 16. | 0.981 |
BC332_06589 | BC332_09915 | A0A2G3CRY2 | A0A2G3D1F2 | DEAD-box ATP-dependent RNA helicase 13; Belongs to the DEAD box helicase family. | CBF domain-containing protein. | 0.975 |
BC332_06589 | BC332_10268 | A0A2G3CRY2 | A0A2G3CKB6 | DEAD-box ATP-dependent RNA helicase 13; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.892 |
BC332_06589 | BC332_16122 | A0A2G3CRY2 | A0A2G3C878 | DEAD-box ATP-dependent RNA helicase 13; Belongs to the DEAD box helicase family. | TMV resistance protein N. | 0.835 |
BC332_06589 | BC332_17999 | A0A2G3CRY2 | A0A2G3BX59 | DEAD-box ATP-dependent RNA helicase 13; Belongs to the DEAD box helicase family. | DEAD-box ATP-dependent RNA helicase 1. | 0.826 |
BC332_06589 | BC332_20374 | A0A2G3CRY2 | A0A2G3BPW3 | DEAD-box ATP-dependent RNA helicase 13; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.983 |
BC332_06589 | BC332_20389 | A0A2G3CRY2 | A0A2G3BPY0 | DEAD-box ATP-dependent RNA helicase 13; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.809 |
BC332_06589 | BC332_21699 | A0A2G3CRY2 | A0A2G3BTP1 | DEAD-box ATP-dependent RNA helicase 13; Belongs to the DEAD box helicase family. | Peter Pan-like protein. | 0.956 |
BC332_06589 | BC332_28627 | A0A2G3CRY2 | A0A2G3BA78 | DEAD-box ATP-dependent RNA helicase 13; Belongs to the DEAD box helicase family. | Something about silencing protein 10. | 0.835 |
BC332_06589 | BC332_33321 | A0A2G3CRY2 | A0A2G3AU58 | DEAD-box ATP-dependent RNA helicase 13; Belongs to the DEAD box helicase family. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.981 |
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