STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_18392Uncharacterized protein. (245 aa)    
Predicted Functional Partners:
BC332_32576
Polynucleotide 5'-hydroxyl-kinase NOL9.
   
 0.974
BC332_31966
Ipi1_N domain-containing protein.
   
 0.927
BC332_19667
Uncharacterized protein.
   
 0.906
BC332_12929
Protein ROOT INITIATION DEFECTIVE 3.
   
 0.906
BC332_31955
U3 small nucleolar ribonucleoprotein IMP4.
   
 
  0.798
BC332_33321
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
  0.790
BC332_18759
BRCT domain-containing protein.
   
 
  0.781
BC332_01665
Putative rRNA-processing protein EBP2-like protein.
   
 
  0.724
BC332_01666
Putative rRNA-processing protein EBP2-like protein.
   
 
  0.724
BC332_08849
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 
  0.694
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.