STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_18459Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC. (196 aa)    
Predicted Functional Partners:
BC332_23656
Ubiquitin carboxyl-terminal hydrolase.
    
 0.805
BC332_27678
Uncharacterized protein.
     
 0.758
BC332_00265
AB hydrolase-1 domain-containing protein.
    
 0.729
BC332_26720
Zinc finger CCCH domain-containing protein 4.
     
 0.673
BC332_18627
MCRS_N domain-containing protein.
     
 0.643
BC332_05432
FHA domain-containing protein.
     
 0.643
BC332_26223
Uncharacterized protein.
    
 0.496
BC332_23387
Uncharacterized protein.
    
 0.496
BC332_10725
Casein kinase II subunit alpha-1; Belongs to the protein kinase superfamily.
   
   0.488
BC332_03658
Casein kinase II subunit alpha-1; Belongs to the protein kinase superfamily.
   
   0.488
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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