STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_19012Cupin_3 domain-containing protein. (143 aa)    
Predicted Functional Partners:
BC332_29827
Fructokinase-like 1, chloroplastic.
   
  
 0.516
BC332_29779
Uncharacterized protein.
      
 0.504
BC332_30390
SAP domain-containing protein.
      
 0.504
BC332_33805
Uncharacterized protein.
      
 0.447
BC332_18295
Uncharacterized protein.
      
 0.447
BC332_32579
Pentatricopeptide repeat-containing protein, chloroplastic.
      
 0.446
BC332_06536
PG_binding_1 domain-containing protein.
      
 0.410
BC332_27896
Single-stranded DNA-binding protein WHY1, chloroplastic.
      
 0.406
BC332_27470
Fructokinase-like 2, chloroplastic.
   
  
 0.405
BC332_25894
Fructokinase-like 2, chloroplastic.
   
  
 0.405
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.