STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_19092Uncharacterized protein. (587 aa)    
Predicted Functional Partners:
BC332_29084
Elongation factor 1-gamma 2.
   
 0.898
BC332_12944
DEAD-box ATP-dependent RNA helicase 2.
   
 0.880
BC332_03080
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.880
BC332_03276
Protein mago nashi-like protein.
   
 0.836
BC332_28069
RNA-binding protein 8A.
    
 0.818
BC332_16814
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.818
BC332_08565
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.818
BC332_31340
40S ribosomal protein S6-1.
   
 0.817
BC332_20483
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.817
BC332_01166
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.817
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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