STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_19319Tyrosine aminotransferase. (420 aa)    
Predicted Functional Partners:
BC332_13446
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.972
BC332_05134
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
  
 
 0.967
BC332_28658
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
  
 
 0.965
BC332_25750
Phenylalanine ammonia-lyase.
   
 
 0.965
BC332_09487
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.962
BC332_19431
Aspartate aminotransferase.
   
 
 0.959
BC332_21088
Aspartate aminotransferase.
   
 
 0.958
BC332_13201
Protein PHYLLO, chloroplastic.
   
 0.955
BC332_13202
Uncharacterized protein.
   
 0.955
BC332_12801
Histidinol-phosphate aminotransferase, chloroplastic.
  
 
 0.954
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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