STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_19354Fasciclin-like arabinogalactan protein 9. (254 aa)    
Predicted Functional Partners:
BC332_14227
Uncharacterized protein.
    
 0.562
BC332_05744
Histone-lysine N-methyltransferase SUVR5.
    
  0.526
BC332_05745
Uncharacterized protein.
    
  0.526
BC332_34535
PDZ domain-containing protein.
    
 0.514
BC332_19901
Glycerophosphodiester phosphodiesterase GDPDL4.
   
 
 0.489
BC332_07280
Serine/threonine-protein phosphatase BSL3.
    
  0.483
BC332_07279
Serine/threonine-protein phosphatase.
    
  0.483
BC332_30305
FAS1 domain-containing protein.
      
 0.469
BC332_22492
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
     
 0.464
BC332_03955
Kinesin-like calmodulin-binding protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.441
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.