STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_19465Protein trichome birefringence-like 43. (389 aa)    
Predicted Functional Partners:
BC332_13532
AD domain-containing protein.
  
     0.524
BC332_18708
Uncharacterized protein.
  
     0.520
BC332_17188
Uncharacterized protein.
  
     0.517
BC332_18827
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.515
BC332_24294
Retrovirus-related Pol polyprotein from transposon TNT 1-94.
  
     0.513
BC332_17195
Uncharacterized protein.
  
     0.511
BC332_17170
Zinc finger CCCH domain-containing protein 14.
  
     0.507
BC332_06327
NB-ARC domain-containing protein.
  
     0.507
BC332_08028
Uncharacterized protein.
  
     0.507
BC332_24825
Uncharacterized protein.
  
     0.506
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.