STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_16236Polyadenylate-binding protein-interacting protein 4. (856 aa)    
Predicted Functional Partners:
BC332_13531
AD domain-containing protein.
    
 0.995
BC332_25850
Putative ataxin-3-like protein.
    
 0.960
BC332_21465
Small nuclear ribonucleoprotein-associated protein.
    
 
 0.883
BC332_25789
DEAD-box ATP-dependent RNA helicase 8; Belongs to the DEAD box helicase family.
    
 
 0.882
BC332_21477
DEAD-box ATP-dependent RNA helicase 8; Belongs to the DEAD box helicase family.
    
 
 0.882
BC332_11320
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.711
BC332_31933
Uncharacterized protein.
   
 
 0.708
BC332_30276
Polyadenylate-binding protein 8.
   
 
 0.708
BC332_31002
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.708
BC332_26012
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.708
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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