STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_16747SWIM-type domain-containing protein. (888 aa)    
Predicted Functional Partners:
BC332_06999
Protein FAR1-RELATED SEQUENCE 11.
  
 
   0.489
BC332_15765
SWIM-type domain-containing protein.
  
 
   0.472
BC332_12148
Protein FAR1-RELATED SEQUENCE 5.
  
 
   0.462
BC332_20068
SWIM-type domain-containing protein.
  
 
   0.456
BC332_08520
SWIM-type domain-containing protein.
  
 
   0.447
BC332_09619
Protein FAR1-RELATED SEQUENCE 4.
  
 
   0.447
BC332_30140
SWIM-type domain-containing protein.
  
     0.444
BC332_01291
FAR1 domain-containing protein.
  
 
   0.444
BC332_09304
Protein FAR1-RELATED SEQUENCE 6.
  
 
   0.432
BC332_02806
SWIM-type domain-containing protein.
  
     0.425
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.