STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_16791Uncharacterized protein. (284 aa)    
Predicted Functional Partners:
BC332_29005
AP-2 complex subunit alpha-2.
   
 0.478
BC332_29006
AP-2 complex subunit alpha-1.
   
 0.478
BC332_16999
AP-2 complex subunit alpha; Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome.
   
 0.478
BC332_26861
MHD domain-containing protein.
   
 
 0.468
BC332_12092
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 
 0.450
BC332_12130
Uncharacterized protein.
   
 0.445
BC332_12238
Uncharacterized protein.
   
 0.445
BC332_06469
Uncharacterized protein.
   
 0.445
BC332_03230
Uncharacterized protein.
   
 0.445
BC332_05159
Uncharacterized protein.
   
 0.445
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.