STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_16872Ribosome-binding factor PSRP1, chloroplastic. (143 aa)    
Predicted Functional Partners:
BC332_16945
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.912
BC332_11974
30S ribosomal protein S9, chloroplastic; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.912
BC332_32263
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
   
 
 0.904
BC332_30768
Uncharacterized protein.
   
 
 0.899
BC332_15923
30S ribosomal protein S16, chloroplastic.
   
 
 0.899
BC332_29043
50S ribosomal protein L9, chloroplastic.
  
   0.896
BC332_05706
Ribosomal_TL5_C domain-containing protein.
  
   0.890
BC332_20883
60S ribosomal protein L5.
    
 
 0.889
BC332_18356
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.877
BC332_05447
Uncharacterized protein.
    
 
 0.877
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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