STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_16907Uncharacterized protein. (236 aa)    
Predicted Functional Partners:
BC332_31400
Ubiquitin-40S ribosomal protein S27a.
    
  0.732
BC332_02496
Ubiquitin-40S ribosomal protein S27a.
    
  0.732
BC332_14024
Uncharacterized protein; Belongs to the histidine acid phosphatase family.
     
 0.541
BC332_00110
GMP synthase [glutamine-hydrolyzing].
    
  0.496
BC332_26861
MHD domain-containing protein.
    
  0.491
BC332_32703
60S ribosomal protein L30.
   
   0.480
BC332_28971
LMWPc domain-containing protein.
    
  0.478
BC332_06576
Uncharacterized protein.
    
  0.476
BC332_32614
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.469
BC332_16751
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.469
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.