STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_17128Uncharacterized protein. (247 aa)    
Predicted Functional Partners:
BC332_01371
DNA polymerase delta small subunit.
    
 0.679
BC332_02413
Crossover junction endonuclease MUS81.
    
 0.624
BC332_07070
Small nuclear ribonucleoprotein Sm D2.
    
 0.574
BC332_26524
Small nuclear ribonucleoprotein F.
    
  0.531
BC332_30224
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.514
BC332_00440
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B.
   
   0.486
BC332_06610
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B.
    
   0.478
BC332_26680
DNA polymerase.
   
 0.474
BC332_08814
Notchless protein-like protein 1.
    
 
 0.465
BC332_29544
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial; Belongs to the complex I 75 kDa subunit family.
    
   0.463
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.