STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_17211Uncharacterized protein. (247 aa)    
Predicted Functional Partners:
BC332_19978
Ubiquitin thioesterase OTU1.
    
 0.632
BC332_18204
Protein OS-9-like protein.
    
 0.631
BC332_25850
Putative ataxin-3-like protein.
   
 0.614
BC332_17611
NPL4-like protein.
    
 0.605
BC332_17706
NPL4-like protein.
    
 0.605
BC332_13458
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.568
BC332_04943
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.568
BC332_13044
UBX domain-containing protein.
    
 0.562
BC332_00270
Plant UBX domain-containing protein 7.
    
 0.562
BC332_27850
Uncharacterized protein.
    
 0.543
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.