STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_17594Zinc finger protein JAGGED. (185 aa)    
Predicted Functional Partners:
BC332_12744
Uncharacterized protein.
  
     0.504
BC332_32169
Tify domain-containing protein.
  
     0.491
BC332_23729
Ethylene-responsive transcription factor-like protein.
  
     0.490
BC332_14707
NB-ARC domain-containing protein.
  
     0.486
BC332_16834
Uncharacterized protein.
  
     0.483
BC332_17155
Uncharacterized protein.
  
     0.478
BC332_17844
TAXi_N domain-containing protein.
  
     0.474
BC332_22653
zf-Di19 domain-containing protein.
  
     0.468
BC332_01486
NAC domain-containing protein.
  
     0.467
BC332_33174
Transcription repressor OFP2.
  
     0.464
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.